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Analysis of DNA Sequence Classification Using Neural Networks - Bioinformatics Course Project - Winter 2022
a web app that can classify how likely specific mutations in DNA are to cause diseases (variant effect prediction). We will deploy and use the state-of-the-art Evo2 large language model, and use it to predict the pathogenicity of single nucleotide variants (SNVs)
A comprehensive Python tool for DNA sequence analysis that provides various molecular biology and bioinformatics functions.
Self-Supervised Pretraining Pipeline for ChordMixer
Flutter-based DNA analysis app | Genetic health reports | Personalized nutrition & fitness recommendations | User-friendly interface
Privacy-focused, open-source tool to analyze raw DNA files (from 23andMe, MyHeritage, AncestryDNA, etc.) directly in your browser. Unlock free insights on health risks, personality traits, metabolism, and more — no data upload required
A Java console application that validates DNA sequences and analyzes the nucleotide (A–T–G–C) distribution.
A robust Python-based bioinformatics tool for comprehensive DNA sequence analysis and manipulation.
This project implements a hybrid machine learning approach for classifying breast cancer from DNA sequences using bidirectional embeddings generated by DNABERT. The study processes over 46 million high-quality DNA sequences to distinguish between cancerous and non-cancerous genomic material.
A Python toolkit for bioinformatics, featuring scripts and projects for DNA/RNA analysis, structural modeling, and classic computational biology challenges (e.g., Rosalind problems).
Command-line bioinformatics toolkit for DNA sequence analysis in Python (GC content, ORF detection, codon usage, translation).
DNA sequence analysis toolkit with GUI and CLI.
Accepts any DNA sequence and processes it, producing various pieces of information such as a list of all open reading frames, reverse complement sequence, GC content, all possible proteins .etc
Probabilistic genotyping software (PGS) is used in criminal investigations to help link a genetic sample — such as a sample from crime-scene evidence — to a person of interest (POI).
MAPS (Modular AFM Processing Software): Ferramenta para segmentação e análise quantitativa de nanoestruturas, desenvolvida como TCC em Ciência da Computação.
Nucleotide sequence visualizer that converts raw input into checker-style tile plots for pattern analysis.
Python laborations. Includes an interactive temperature converter, file and error handling, data plotting, and object-oriented DNA sequence analyses.
A Java program for analyzing DNA sequences and identifying individuals based on Short Tandem Repeats (STRs). Features profile database creation, STR analysis, individual identification, and relationship detection.
Bioinformatics mini-project implementing the GC-skew and minimum-skew algorithm used in bacterial origin-of-replication detection.
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