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Command-line bioinformatics toolkit for DNA sequence analysis in Python (GC content, ORF detection, codon usage, translation).

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DNA Toolkit

DNA Toolkit is a command-line bioinformatics tool for performing fundamental DNA sequence analyses in a reproducible and modular manner.

Features

  • GC content calculation
  • Reverse complement generation
  • ORF detection
  • Codon usage analysis
  • DNA to protein translation

Requirements

  • Python 3.9+
  • pytest

Install dependencies:

pip install -r requirements.txt

Usage

python dna_toolkit.py

Testing

pytest

License

MIT License

Author

Mohammad Elsharkawy

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Command-line bioinformatics toolkit for DNA sequence analysis in Python (GC content, ORF detection, codon usage, translation).

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