Skip to content
View athenamarou's full-sized avatar

Block or report athenamarou

Block user

Prevent this user from interacting with your repositories and sending you notifications. Learn more about blocking users.

You must be logged in to block users.

Maximum 250 characters. Please don't include any personal information such as legal names or email addresses. Markdown supported. This note will be visible to only you.
Report abuse

Contact GitHub support about this user’s behavior. Learn more about reporting abuse.

Report abuse
athenamarou/README.md

Hi there, I'm Athena! 👋

I am a Bioinformatics Master's Student with interest for bridging the gap between Biology and Computer Science. I like exploring how programming can solve complex biological problems.

🧬 About Me

  • I graduated from the Department of Biotechnology of the Agricultural University of Athens.
  • 🎓 Currently doing my Master's in Bioinformatics.
  • 💻 I enjoy coding.

🛠 Tech Stack

  • Languages: Python (Primary), R, Bash
  • Mools & Libraries: Biopython, Pandas, NumPy, Matplotlib, Scipy, Scikit-learn, etc..

🎓 Master's Degree Projects

As part of my MSc in Bioinformatics at the University of Crete, I completed a series of coursework projects for the 'Programming with Python' course, focusing on computational analysis and algorithmic implementation:

  • Drug-Interaction-ML-Classifier (Project 1)
  • Genomic-Disease-Association-FisherTest (Project 2)
  • Mondo-Ontology-Hierarchy-Parser (Project 3)
  • Metagenomic-Kmer-Diversity-Analysis (Project 4)
  • Cancer-Systems-Biology-Boolean-Networks (Project 5)
  • Polypharmacy-Side-Effect-Network (Project 6)
  • DNA-Tokenization-BPE-Algorithm (Project 7)

📫 How to reach me:

Popular repositories Loading

  1. athenamarou athenamarou Public template

  2. Drug-Interaction-ML-Classifier Drug-Interaction-ML-Classifier Public

    Predicting Drug-Drug Interactions (DDI) using Machine Learning and molecular features (Morgan/RDKit)

    Python

  3. Genomic-Disease-Association-FisherTest Genomic-Disease-Association-FisherTest Public

    Statistical analysis of gene-disease associations using Fisher's Exact Test and Mondo Disease Ontology.

    Python

  4. Mondo-Ontology-Hierarchy-Parser Mondo-Ontology-Hierarchy-Parser Public

    A Python-based parser for navigating the Mondo Disease Ontology graph, mapping diseases to specific hierarchical categories using recursive traversal.

    Python

  5. Metagenomic-Kmer-Diversity-Analysis Metagenomic-Kmer-Diversity-Analysis Public

    Quantitative comparison of environmental DNA samples using K-mer frequency profiles, Jaccard similarity, and MDS visualization.

    Python