Ontogenesis — Human Digital Twin Ontology

Base IRI: https://socioprophet.dev/ont/ontogenesis#, Version IRI: https://socioprophet.dev/ont/ontogenesis#v0.3.0, Generated: 2025-08-28T22:28:24.218856Z

Contents: OWL (ontogenesis.ttl), SKOS (skos/*.ttl), SHACL (shapes/*.ttl), mappings, JSON-LD context, examples, tests, CapD.

Quickstart

Install validation deps (local dev):

python3 -m venv .venv && . .venv/bin/activate && pip install -r requirements.txt

Validate ontology + examples:

make validate

Repo layout

• ontogenesis.ttl — core ontology (Turtle)
• skos/*.ttl — SKOS concept schemes/vocab
• shapes/*.ttl — SHACL shapes (constraints)
• mappings/*.ttl — interoperability mappings (e.g., PROV, FHIR, IEML)
• context.jsonld — JSON-LD context
• examples/*.ttl — example datasets
• tests/*.rq — SPARQL invariant tests (should return 0 rows)
• capd/*.json — CapD descriptor for capability packaging

Diagrams