From ddca89149c57fc3d9c3556d5cd7f752587a6e527 Mon Sep 17 00:00:00 2001 From: EnfxcFCb6 Date: Mon, 2 Jun 2025 12:04:40 -0400 Subject: [PATCH 1/2] Standardized README to Markdown format --- readme.html => README.md | 22 ++++++++++++---------- 1 file changed, 12 insertions(+), 10 deletions(-) rename readme.html => README.md (78%) diff --git a/readme.html b/README.md similarity index 78% rename from readme.html rename to README.md index d16d6b5..074ed23 100644 --- a/readme.html +++ b/README.md @@ -1,11 +1,10 @@ -
-This is the readme for the model associated with the papers:
+# This is the readme for the model associated with the papers:
 
 Ref: Laventovich and Hemkin, A mathematical model of spontaneous
-calcium(II) oscillations in astrocytes.  J Theor Biol 2008;
+calcium(II) oscillations in astrocytes. *J Theor Biol* 2008;
 251(4):553-60.
 
-Abstract:
+## Abstract:
 
 Astrocytes exhibit oscillations and waves of Ca2+ ions within their
 cytosol and it appears that this behavior helps facilitate the
@@ -21,23 +20,26 @@
 mimicking experimental constraints we have found that this model
 provides results that are qualitatively similar to experiment.
 
-To run the model:
+## To run the model:
 
 Expand the archive and cd into the newly created directory and run:
-xppaut Ca-Oscil-Astrocyte.ode
+`xppaut Ca-Oscil-Astrocyte.ode`
 then click on Initialcond -> Go
 
-screenshot
+![screenshot](./Glia-Oscill.JPG)
 
 This simulation will make graphs similar to the paper of Laventovich
-and Hemkin.  Note that the cytosolic calcium concentration shown in
+and Hemkin. Note that the cytosolic calcium concentration shown in
 figure 3 of the paper should be increased by 10-fold.
 
-The model file was supplied by:
+## The model file was supplied by:
 
 Dr. Sheng-Nan Wu
 Cardiac Electrophysiology and Systems-biology Center (CESC)
 National Cheng Kung University Medical College
 Tainan 70101, Taiwan
 e-mail: snwu@mail.ncku.edu.tw
-
+ +--- + +2025-06-02: Standardized to Markdown. \ No newline at end of file From c47e4e2da079bedc81df28a8b9d7836ae9169fae Mon Sep 17 00:00:00 2001 From: rsakai Date: Mon, 2 Jun 2025 12:18:39 -0400 Subject: [PATCH 2/2] Update README.md --- README.md | 10 +++++----- 1 file changed, 5 insertions(+), 5 deletions(-) diff --git a/README.md b/README.md index 074ed23..eb2066a 100644 --- a/README.md +++ b/README.md @@ -34,12 +34,12 @@ figure 3 of the paper should be increased by 10-fold. ## The model file was supplied by: -Dr. Sheng-Nan Wu -Cardiac Electrophysiology and Systems-biology Center (CESC) -National Cheng Kung University Medical College -Tainan 70101, Taiwan +Dr. Sheng-Nan Wu +Cardiac Electrophysiology and Systems-biology Center (CESC) +National Cheng Kung University Medical College +Tainan 70101, Taiwan e-mail: snwu@mail.ncku.edu.tw --- -2025-06-02: Standardized to Markdown. \ No newline at end of file +2025-06-02: Standardized to Markdown.