diff --git a/readme.html b/README.md similarity index 69% rename from readme.html rename to README.md index d16d6b5..eb2066a 100644 --- a/readme.html +++ b/README.md @@ -1,11 +1,10 @@ -
-This is the readme for the model associated with the papers: +# This is the readme for the model associated with the papers: Ref: Laventovich and Hemkin, A mathematical model of spontaneous -calcium(II) oscillations in astrocytes. J Theor Biol 2008; +calcium(II) oscillations in astrocytes. *J Theor Biol* 2008; 251(4):553-60. -Abstract: +## Abstract: Astrocytes exhibit oscillations and waves of Ca2+ ions within their cytosol and it appears that this behavior helps facilitate the @@ -21,23 +20,26 @@ mimicking experimental constraints we have found that this model provides results that are qualitatively similar to experiment. -To run the model: +## To run the model: Expand the archive and cd into the newly created directory and run: -xppaut Ca-Oscil-Astrocyte.ode +`xppaut Ca-Oscil-Astrocyte.ode` then click on Initialcond -> Go -+ +--- + +2025-06-02: Standardized to Markdown.+ This simulation will make graphs similar to the paper of Laventovich -and Hemkin. Note that the cytosolic calcium concentration shown in +and Hemkin. Note that the cytosolic calcium concentration shown in figure 3 of the paper should be increased by 10-fold. -The model file was supplied by: +## The model file was supplied by: -Dr. Sheng-Nan Wu -Cardiac Electrophysiology and Systems-biology Center (CESC) -National Cheng Kung University Medical College -Tainan 70101, Taiwan +Dr. Sheng-Nan Wu +Cardiac Electrophysiology and Systems-biology Center (CESC) +National Cheng Kung University Medical College +Tainan 70101, Taiwan e-mail: snwu@mail.ncku.edu.tw -